ConsensusPathDB information     



ConsensusPathDB statistics

physical entities:    158523
interactions:    458570
pathways:    4593


Overlap statistics

Number of unique* interactions shared by databases. The numbers in the blue diagonal correspond to the number of unique interactions imported from the according interaction data source.
Reactome Kegg Humancyc Pid Biocarta Netpath Inoh Ehmn Phosphositeplus Innatedb Intact Dip Mint Hprd Corum Biogrid Mips-mppi Bind Pdb Matrixdb Pindb Spike Pig Phosphopoint Pdzbase Pharmgkb Smpdb Signalink Drugbank Ttd Chembl Wikipathways
Reactome 12940 411 410 426 140 134 261 449 73 166 496 306 187 779 151 635 13 400 134 5 24 396 0 161 0 0 0 0 4 0 0 0
Kegg 411 6402 294 0 4 0 370 1101 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 581 55 149 0
Humancyc 410 294 2937 6 10 1 128 326 0 10 86 35 31 153 10 126 0 80 5 0 0 36 0 4 0 0 0 0 0 0 0 0
Pid 426 0 6 7719 318 356 113 3 395 275 338 234 145 670 137 560 20 275 121 3 5 687 0 463 0 0 0 0 0 0 0 0
Biocarta 140 4 10 318 2323 170 54 10 210 122 97 74 48 153 43 138 8 81 47 0 2 307 0 211 0 0 0 0 0 0 0 0
Netpath 134 0 1 356 170 2839 79 0 415 449 636 328 435 1468 58 1176 20 310 91 2 2 1573 0 872 0 0 0 0 0 0 0 0
Inoh 261 370 128 113 54 79 1898 387 34 54 62 46 34 95 24 76 1 60 15 0 0 98 0 61 0 0 0 0 0 0 0 0
Ehmn 449 1101 326 3 10 0 387 3893 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0
Phosphositeplus 73 0 0 395 210 415 34 0 2132 219 0 0 0 0 0 0 0 0 0 0 0 803 0 773 0 0 0 0 0 0 0 0
Innatedb 166 0 10 275 122 449 54 0 219 11845 1654 447 645 2197 82 5273 34 653 186 6 2 1530 0 937 0 0 0 0 0 0 0 0
Intact 496 0 86 338 97 636 62 0 0 1654 65643 1504 16172 13369 332 35989 113 3154 805 53 29 21979 0 2608 0 0 0 0 0 0 0 0
Dip 306 0 35 234 74 328 46 0 0 447 1504 5589 711 1892 169 2734 51 705 610 7 9 1254 0 447 0 0 0 0 1 0 0 0
Mint 187 0 31 145 48 435 34 0 0 645 16172 711 18057 8395 124 11723 60 1763 354 3 7 11416 0 1703 0 0 0 0 0 0 0 0
Hprd 779 0 153 670 153 1468 95 0 0 2197 13369 1892 8395 40485 602 24161 284 5935 934 43 29 16659 0 7110 0 0 0 0 2 0 0 0
Corum 151 0 10 137 43 58 24 0 0 82 332 169 124 602 1682 344 10 248 85 1 71 242 0 66 0 0 0 0 0 0 0 0
Biogrid 635 0 126 560 138 1176 76 0 0 5273 35989 2734 11723 24161 344 168966 231 4931 1102 33 19 19802 0 4116 0 0 0 0 0 0 0 0
Mips-mppi 13 0 0 20 8 20 1 0 0 34 113 51 60 284 10 231 323 272 36 2 0 152 0 40 0 0 0 0 0 0 0 0
Bind 400 0 80 275 81 310 60 0 0 653 3154 705 1763 5935 248 4931 272 18778 439 8 6 3393 0 1367 0 0 0 0 26 0 0 0
Pdb 134 0 5 121 47 91 15 0 0 186 805 610 354 934 85 1102 36 439 1962 5 6 658 0 147 0 0 0 0 0 0 0 0
Matrixdb 5 0 0 3 0 2 0 0 0 6 53 7 3 43 1 33 2 8 5 436 0 14 0 2 0 0 0 0 0 0 0 0
Pindb 24 0 0 5 2 2 0 0 0 2 29 9 7 29 71 19 0 6 6 0 207 21 0 4 0 0 0 0 0 0 0 0
Spike 396 0 36 687 307 1573 98 1 803 1530 21979 1254 11416 16659 242 19802 152 3393 658 14 21 38742 0 3559 0 0 0 0 1 0 0 0
Pig 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 20090 0 0 0 0 0 0 0 0 0
Phosphopoint 161 0 4 463 211 872 61 0 773 937 2608 447 1703 7110 66 4116 40 1367 147 2 4 3559 0 10034 0 0 0 0 0 0 0 0
Pdzbase 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Pharmgkb 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Smpdb 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Signalink 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Drugbank 4 581 0 0 0 0 0 0 0 0 0 1 0 2 0 0 0 26 0 0 0 1 0 0 0 0 0 0 13726 562 498 0
Ttd 0 55 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 562 3231 146 0
Chembl 0 149 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 498 146 143270 0
Wikipathways 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0


Number of uniuqe** physical entities shared by databases. The numbers in the blue diagonal correspond to the number of unique physical entities imported from the according interaction data source.
Reactome Kegg Humancyc Pid Biocarta Netpath Inoh Ehmn Phosphositeplus Innatedb Intact Dip Mint Hprd Corum Biogrid Mips-mppi Bind Pdb Matrixdb Pindb Spike Pig Phosphopoint Pdzbase Pharmgkb Smpdb Signalink Drugbank Ttd Chembl Wikipathways
Reactome 20273 2035 3010 2201 1258 1034 1111 1952 1460 2255 5619 2088 3532 5145 1971 6333 304 4128 1338 157 461 4698 2128 2018 0 103 0 0 2038 611 1078 0
Kegg 2035 4379 2101 278 233 108 1061 2030 195 305 1146 226 590 960 163 1449 30 951 133 10 37 885 370 239 0 240 0 0 1323 523 500 0
Humancyc 3010 2101 8588 680 489 358 1009 2163 700 818 2424 639 1369 2062 492 2898 84 1861 405 47 94 1934 741 845 0 64 0 0 1517 306 840 0
Pid 2201 278 680 6950 1055 885 395 372 1040 1398 2434 1270 1684 2349 1016 2649 262 2134 824 104 201 2601 1053 1398 0 26 0 0 640 266 522 0
Biocarta 1258 233 489 1055 2884 532 308 281 613 830 1296 772 972 1309 643 1387 186 1151 504 53 134 1325 681 822 0 41 0 0 531 227 405 0
Netpath 1034 108 358 885 532 1611 243 201 665 833 1298 772 1083 1300 640 1347 185 1068 474 39 115 1301 689 909 0 4 0 0 309 134 302 0
Inoh 1111 1061 1009 395 308 243 2314 837 235 310 700 280 436 624 214 776 60 642 175 16 11 611 292 297 0 26 0 0 640 147 230 0
Ehmn 1952 2030 2163 372 281 201 837 4379 346 432 1219 315 705 1047 294 1458 41 1011 197 18 55 971 403 426 0 55 0 0 962 204 424 0
Phosphositeplus 1460 195 700 1040 613 665 235 346 2226 1174 2094 1067 1618 1999 832 2169 218 1588 639 38 220 1954 941 1382 0 1 0 0 501 199 524 0
Innatedb 2255 305 818 1398 830 833 310 432 1174 5173 3698 1523 2619 3286 1299 4056 250 2955 926 88 327 3410 1575 1602 0 4 0 0 709 236 484 0
Intact 5619 1146 2424 2434 1296 1298 700 1219 2094 3698 14770 2748 6744 8427 2419 11909 377 6476 1744 161 638 8593 3521 2949 0 22 0 0 1684 448 1003 0
Dip 2088 226 639 1270 772 772 280 315 1067 1523 2748 2982 2101 2667 1292 2872 266 2192 1180 84 393 2578 1337 1356 0 17 0 0 622 267 459 0
Mint 3532 590 1369 1684 972 1083 436 705 1618 2619 6744 2101 7185 5779 1929 6474 323 4184 1337 101 499 5875 2423 2335 0 11 0 0 1033 271 656 0
Hprd 5145 960 2062 2349 1309 1300 624 1047 1999 3286 8427 2667 5779 9846 2279 9351 385 5672 1681 172 596 7746 3032 3091 0 26 0 0 1626 497 1057 0
Corum 1971 163 492 1016 643 640 214 294 832 1299 2419 1292 1929 2279 4225 2490 230 1972 740 55 554 2300 1139 1131 0 3 0 0 440 133 298 0
Biogrid 6333 1449 2898 2649 1387 1347 776 1458 2169 4056 11909 2872 6474 9351 2490 18557 386 8280 1801 171 653 9114 3755 3097 0 23 0 0 1943 512 1115 0
Mips-mppi 304 30 84 262 186 185 60 41 218 250 377 266 323 385 230 386 400 383 175 15 55 376 228 277 0 1 0 0 111 52 100 0
Bind 4128 951 1861 2134 1151 1068 642 1011 1588 2955 6476 2192 4184 5672 1972 8280 383 12766 1421 137 499 5899 2476 2298 0 61 0 0 1523 427 838 0
Pdb 1338 133 405 824 504 474 175 197 639 926 1744 1180 1337 1681 740 1801 175 1421 1963 68 195 1624 792 851 0 15 0 0 466 182 324 0
Matrixdb 157 10 47 104 53 39 16 18 38 88 161 84 101 172 55 171 15 137 68 217 2 159 89 71 0 4 0 0 80 37 48 0
Pindb 461 37 94 201 134 115 11 55 220 327 638 393 499 596 554 653 55 499 195 2 862 606 327 249 0 0 0 0 48 14 44 0
Spike 4698 885 1934 2601 1325 1301 611 971 1954 3410 8593 2578 5875 7746 2300 9114 376 5899 1624 159 606 10914 3005 2834 0 27 0 0 1430 402 898 0
Pig 2128 370 741 1053 681 689 292 403 941 1575 3521 1337 2423 3032 1139 3755 228 2476 792 89 327 3005 7570 1272 0 8 0 0 631 178 376 0
Phosphopoint 2018 239 845 1398 822 909 297 426 1382 1602 2949 1356 2335 3091 1131 3097 277 2298 851 71 249 2834 1272 3188 0 6 0 0 663 249 613 0
Pdzbase 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Pharmgkb 103 240 64 26 41 4 26 55 1 4 22 17 11 26 3 23 1 61 15 4 0 27 8 6 0 1045 0 0 932 736 219 0
Smpdb 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 717 0 0 0 0 0
Signalink 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Drugbank 2038 1323 1517 640 531 309 640 962 501 709 1684 622 1033 1626 440 1943 111 1523 466 80 48 1430 631 663 0 932 0 0 6601 1409 1057 0
Ttd 611 523 306 266 227 134 147 204 199 236 448 267 271 497 133 512 52 427 182 37 14 402 178 249 0 736 0 0 1409 3537 689 0
Chembl 1078 500 840 522 405 302 230 424 524 484 1003 459 656 1057 298 1115 100 838 324 48 44 898 376 613 0 219 0 0 1057 689 93724 0
Wikipathways 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 657


Number of defined biological pathways in interaction data sources.***
Reactome 1786
Kegg 297
Humancyc 331
Pid 226
Biocarta 254
Netpath 35
Inoh 93
Ehmn 69
Phosphositeplus 0
Innatedb 0
Intact 0
Dip 0
Mint 0
Hprd 0
Corum 0
Biogrid 0
Mips-mppi 0
Bind 0
Pdb 0
Matrixdb 0
Pindb 0
Spike 0
Pig 0
Phosphopoint 0
Pdzbase 0
Pharmgkb 113
Smpdb 717
Signalink 15
Drugbank 0
Ttd 0
Chembl 0
Wikipathways 657



Versions of integrated databases
Reactome 53
Kegg 75.0
Humancyc 19.1
Pid 2014_02_14
Biocarta 2009_05_12
Netpath 29.8.2015
Inoh 29.8.2015
Ehmn 29.8.2015
Phosphositeplus 29.8.2015
Innatedb 29.8.2015
Intact 2013-09-02+01:00
Dip 2015-07-01
Mint 2011-12-02+01:00
Hprd I_041210
Corum 29.8.2015
Biogrid 3.4.127
Mips-mppi 29.8.2015
Bind 29.8.2015
Pdb 29.8.2015
Matrixdb 20120801
Pindb 29.8.2015
Spike 29.8.2015
Pig 30.8.2015
Phosphopoint 30.8.2015
Pdzbase 31.8.2015
Pharmgkb 31.8.2015
Smpdb 1.9.2015
Signalink 1.9.2015
Drugbank 1.9.2015
Ttd 1.9.2015
Chembl 1.9.2015
Wikipathways 1.9.2015



* Interactions are mapped to each other if their primary participants (products and substrates in biochemical reactions, interactors in protein interactions and genetic interactions, transcription factors and regulated gene in gene regulatory interactions, and drug and target in drug-target interactions) are identical based on their accession numbers. Different molecule states and subcellular localization are disregarded when calculating the number of unique interactions.
** Physical entities are mapped tp each other if they have the same accession numbers and/or components (in the case of complexes and entity groups). This means that different states (e.g. posttranslational modifications) and subcellular localization are disregarded when calculating the number of unique entities.
*** Biological pathways from different sources are not mapped to each other. Some sources (like the ones containing protein interactions only) do not define pathways.